Description

The aim of SVGMap is helping in the visualisation of experimental data which are associated with some graphical representation. Thus SVGMap browser allows to generate images with colored areas corresponding to the chosen data and color scale.

The data is represented as a table and is searchable. All data as well as the generated images/figures can be exported easily through the interface.

Additionally the tool allows to manage (add, edit or delete) experiments and configure the front-end user search appearance such as the number of images to be displayed, the scale types to use and more.

Demo website

You can browse a demonstration website here http://bg.upf.edu/svgmap

Documentation

• Introduction. What is SVGMap?
• Download. Where and how to get SVGMap?
• User guide. How to use and adapt SVGMap?
• Development guide. Notes about the analysis and development of the software.

Cite usage

Rafael-Palou, X., Schroeder, M. P. & Lopez-Bigas, N. SVGMap: configurable image browser for experimental data. Bioinformatics 28, 119–120 (2011).