- changed status to resolved
Unnecesary parameters in circRNAs example 4.1
Issue #36
resolved
Example 4.1 has the following parameters: ;This value refers to filter processing in the reads (Should be "yes" or "no"). filter=no ;Cutoff for the counts per million value to be used in filter processing with EdgeR cpmvalue=0 ;Number of replicates that have to contains at least a defined number of reads per million to perform the filter with EdgeR software repthreshold=1
For filter=no, cpmvalue and repthreshold are completely unnecesary since this parameters defines the filtering process.
There is two possibilities: - Change filter=no for filter=yes - Remove cpmvalue and repthreshold parameters
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Fixing issue
#36→ <<cset dd71e9364b29>>