-
assigned issue to
correlation tool fails to call check_outdir()
issue #9 is closely related to this
as a temporary workaround, you can manually create output directories before running lib5c correlation
Comments (2)
-
reporter -
reporter - changed status to closed
major overhaul of counts/primermap parsing and plotting API
plotting API is now formalized in a new decorator:
@lib5c.util.plotting.plotter
most plotters now follow this API, except for the old heatmap plotters and cluster heatmap plotters, as well as legacy plotters
primermap/counts parsing is now standardized in line with modules2016: only two functions are supported:
load_primermap()
andload_counts()
all tools have been updated to reflect this change
lib5c.tools.helpers.resolve_level()
has been broken up intolib5c.tools.helpers.resolve_level()
andlib5c.tools.helpers.resolve_primerfile()
- this helper is only needed in a small number of toolslib5c.tools.parents.level_parser
has been broken up intolib5c.tools.parents.level_parser
andlib5c.tools.parents.primerfile_parser
-level_parser
is used rarely whileprimerfile_parser
is ubiquitousthis closes
#23, closes#21, closes#18, closes#22, closes#11, and closes#9→ <<cset f4e899afa042>>
- Log in to comment