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Issues (1–25 of 430)

Title T P Status Votes Assignee Version Created Updated Actions
#962: warning in NMA analysis for PDB ensemble input
ToDo
task major invalid
#963: How PCA contribution analysis reads residue numbers from PDB files instead of starting at 1
Q&A
task major new
#961: RMSF issue for multiple dcd file
Q&A
task major new
#959: Weighted Cross-Correlation
task minor new
#958: Superimpose PCA plot
task minor new
#956: Manual specification of network communities
task minor new
#953: How to save DCCM plot generated by Bio3d in linux operation system as png format?
Q&A
task major new
#951: Missing Residues in PCA Analysis
task major resolved
#888: Weighted RMSF
task minor new
#949: Assessing Validity of PCA results
Q&A
task major new
#922: Selection of cutoff.cij value
task major new
#920: How to implement elbow method for clustering to find the optimal K and how to generate a sorted table of eigenvalues with eigenvectors?
Q&A
task major new
#907: sse annotation not outputting with plot.dccm graph's margin
task major new
#918: Torsion PCA issue
task major new
#913: Extract multiple selective frames from a dcd trajectory file
task major new
#899: Usage of tor.xyz for a trajectory file
task major resolved
#876: Is it possible to calculate RoG from a MD trajectory file?
Q&A
task major resolved
#908: proportion of variance%
task major new
#902: Help with PCA Projection
task major new
#906: PCA Singular Value Decomposition (SVD) approach is faster and is recommended (set 'use.svd = TRUE')
task minor new
#905: Mira
Q&A
task major new
#903: Plotting PCA in 3d
Q&A
task minor new
#813: network analysis of molecular dynamics trajectories.
task major new
#883: help with using distance matrix calculation.
Q&A
task critical new
#900: What is the index I get from using identify() in a plotted PCA analysis?
Q&A
task minor new
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