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Issues (51–75 of 125)

Title T P Status Votes Assignee Version Created Updated Actions
#612: contact map filter by residue number
Q&A
task minor resolved
#613: Error in cmdscale(dist(cent), k = k) : NA values not allowed in 'd'
proposal minor resolved
#619: cm=dccm.nma(modes) or cm=dccm(modes) shows bug or error
Q&A
bug major resolved
#622: PDBs object sidechain selection
Q&A
proposal major resolved
#626: Non zero exit status of packages while installing bio3d
Q&A
task minor resolved
#635: Error Loading DCD file
ToDo
bug minor resolved
#623: Frequency of movements during PCA
Q&A
task major resolved
#600: NMA on self-curated pdb files
Q&A
task minor resolved
#610: How to store only first mode result in aanma.pdbs()/nma.pdbs()?
Q&A
task minor resolved
#586: warning about read.dcd() and some problems about protein structure network
bug major resolved
#587: Generating protein motion movie from aanma or nma?
Q&A
task minor new
#579: Unable to read dcd file
bug major resolved
#542: Problem reading multiframe PDB with read.pdb()
ToDo
task minor open
#506: Error in flucts[i, ] <- all.modes[[i]]$fluctuations :
ToDo
bug minor resolved
#574: pymol.dccm(cij, pdb, type="launch") not work
Q&A
bug major resolved
#557: RMSD_ERROR
Q&A
task minor resolved
#558: Can RMSIP include trivial modes for calculation?
Q&A
task trivial resolved
#561: aanma with rtb=TRUE still distorts residues
Q&A
task minor resolved
#562: why different values for fluct.nma(modes, mod.inds=c(7,total.no.of.modes)) and modes$fluctuations?
Q&A
task minor resolved
#537: NMA with non-standard residue name
Q&A
task trivial resolved
#468: 1JTW error
ToDo
proposal minor new
#509: get.seq changing PDB IDs leading to seg fault
ToDo
proposal minor new
#551: dccm calc for large protein hangs on Mac OSX R-console
ToDo
bug major resolved
#534: Torsion calculation for PDBs with duplicated resno
ToDo
bug minor resolved
#528: error_ ensemble NMA
ToDo
task minor new
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