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Issues (176–197 of 197)

Title T P Status Votes Assignee Milestone Created Updated Actions
#29: TypeError (on attempt to iterate over db_gen instance )
bug major resolved
#27: Add TCR support to IgRecord
enhancement minor resolved
#28: long fasta headers break igblast parser ?
bug major resolved
#26: Remove the unzipped folder from the MakeDb output
enhancement minor resolved
#18: DefineClones fails to execute with "bygroup --model aa"
bug major resolved
#22: CreateGermlines.py provides incorrect germline
bug major resolved
#21: DefineClones fatal error: could not find function "slidingArrayOf5mers"
bug minor resolved
#17: MakeDb needs support for both old and new IMGT sequence ID mangling
enhancement major resolved
#19: DefineClones bygroup --model aa does not support gaps in the sequence
bug minor resolved
#20: The amino acid part of DefineClones::distanceClones rebuilds the score_dict with each call
enhancement minor resolved
#5: CreateGermlines log output needs improvement
enhancement major resolved
#16: loading error on "DefineClones.py bygroup -h"
bug minor resolved
#8: IgCore::getCommonArgParser --clean flag is not present in Change-O scripts
enhancement major resolved
#1: MakeDb fails to run with --log option
bug critical resolved
#2: MakeDb extracts IMGT files to wrong location
bug minor resolved
#3: MakeDb --noParse help is incorrect
bug minor resolved
#4: MakeDb imgt parsing passes invalid records
bug major resolved
#9: MakeDb code does not support --clean flag
enhancement major resolved
#10: CreateGermlines does not support --clean flag
enhancement major resolved
#11: MakeDb assigns output file name incorrectly
bug minor resolved
#7: DefineClones default distance appears incorrect
bug trivial resolved
#12: MakeDb fails to execute with --outname argument
bug critical resolved
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