1. chicagoTeam Avatar chicagoTeam
  2. Untitled project
  3. Chicago

Issues

Filter by:

Advanced search

Issues (1–25 of 82)

Title T P Status Votes Assignee Created Updated Actions
#5: runChicago.R is not able to parse input parameters
bug major resolved
chicagoTeam
#4: .chinput does not show actual distance?
bug major resolved
chicagoTeam
#2: Error in get(binCol) : invalid first argument
bug critical resolved
chicagoTeam
#1: Error in vecseq when running estimateTechnicalNoise
bug blocker resolved
#6: Calculating p-values [update in Delaporte package breaks compatibility]
bug blocker resolved
chicagoTeam
#3: Different problems running replicates
bug major resolved
chicagoTeam
#9: Examples data / playground data
proposal minor new
#8: Error in normaliseOtherEnds when combining multiple datsets
bug major resolved
chicagoTeam
#7: ./bam2chicago.sh errors
bug major resolved
chicagoTeam
#16: Error: rmap file should have 4 columns
bug minor new
chicagoTeam
#12: correct workflow for weight recalibration
task major resolved
chicagoTeam
#10: Differing numbers of interactions reported in seqmonk and washU output files
bug major resolved
chicagoTeam
#11: Altering rmap files in specific genomic regions
task major resolved
#13: Minimum spacing between viewpoints?
task major resolved
chicagoTeam
#14: bam2chicago bedtools error
task major resolved
#18: en_full_cis_range and en-trans
task major resolved
#19: runChicago Error
bug major new
#21: Error while running readAndMerge()
bug major resolved
chicagoTeam
#23: Is it possible to set a random seed - each run of chicago yields a different number of interactions
proposal major new
chicagoTeam
#22: run Chicago Error
bug major new
#26: all interactions filtered out - error
bug major new
chicagoTeam
#28: BAM2chicago awk error
bug major resolved
#29: Bam2chicago: no such file or directory
bug major resolved
#27: Not able to generate .baitmap files using create_baitmap_rmap.pl
task minor resolved
#25: Reads filtered from chinput file?
bug major resolved
chicagoTeam
  2. 1
  3. 2
  4. 3
  5. 4