1. chicagoTeam Avatar chicagoTeam
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  3. Chicago

Issues

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Issues (1–25 of 53)

Title T P Status Votes Assignee Created Updated Actions
#1: Error in vecseq when running estimateTechnicalNoise
bug blocker resolved
#2: Error in get(binCol) : invalid first argument
bug critical resolved
chicagoTeam
#3: Different problems running replicates
bug major resolved
chicagoTeam
#4: .chinput does not show actual distance?
bug major resolved
chicagoTeam
#5: runChicago.R is not able to parse input parameters
bug major resolved
chicagoTeam
#6: Calculating p-values [update in Delaporte package breaks compatibility]
bug blocker resolved
chicagoTeam
#7: ./bam2chicago.sh errors
bug major resolved
chicagoTeam
#8: Error in normaliseOtherEnds when combining multiple datsets
bug major resolved
chicagoTeam
#10: Differing numbers of interactions reported in seqmonk and washU output files
bug major resolved
chicagoTeam
#16: Error: rmap file should have 4 columns
bug minor new
chicagoTeam
#19: runChicago Error
bug major new
#20: Error: cannot allocate vector of size ...
bug blocker resolved
chicagoTeam
#21: Error while running readAndMerge()
bug major resolved
chicagoTeam
#22: run Chicago Error
bug major new
#25: Reads filtered from chinput file?
bug major resolved
chicagoTeam
#26: all interactions filtered out - error
bug major new
chicagoTeam
#28: BAM2chicago awk error
bug major resolved
#29: Bam2chicago: no such file or directory
bug major resolved
#30: makeDesignFiles.py
bug major resolved
#32: Chicago package cannot using its own truncated maxLBrownEst
bug major new
#33: bam2chicago.sh worng number of fields
bug major new
#35: Cut2 odd behaviour
bug major new
#41: bam2chicago problem
bug major new
#43: 'bam2chicago.sh' problem
bug major new
#44: WashU output
bug major new
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