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Issues (76–100 of 197)

Title T P Status Votes Assignee Milestone Created Updated Actions
#130: Installation issue with pip v10
bug major resolved
#126: Add validation test for SEQUENCE_IMGT to MakeDb
bug major resolved
#124: setup.py not compatible with pip 10
bug major resolved
#123: MakeDb.py, KeyError: 'subject seq'
bug major resolved
#114: Additional features to add to ConvertDb-genbank
enhancement major resolved
#122: Write a reverse ConvertDb-genbank
enhancement major new
#109: Cleanup Receptor and format parsing code
enhancement major resolved
#107: Verify V_SEQ_LENGTH is correct when indels are present
bug minor resolved
#120: Check all field arguments for case sensitivity
task trivial resolved
#106: Verify J_SEQ_START and D_SEQ_START bug is gone
bug major resolved
#121: Clarify the behavior of first and set actions in DefineClones usage docs
enhancement trivial resolved
#119: Convert output handle checks to try blocks
enhancement trivial resolved
#115: junction_aa contains extra AA before conserved C residue for TCR alpha
bug major resolved
#73: Add more detail to data standard docs
enhancement trivial resolved
#116: Added support to MakeDb-igblast for non-standard gene names
enhancement minor resolved
#94: Add gene column arguments to DefineClones
enhancement minor resolved
#103: Tools should not create empty fail file
enhancement minor resolved
#84: Flesh out MakeDb unit tests
enhancement major new 2
#118: no junction or junction_aa in AIRR/ChangeO format
bug major resolved
#51: MakeDb does not handle IgBLAST mangling of sequence descriptions with tab characters
bug minor wontfix
#71: INDEL in J sequense
bug minor resolved
#78: Add additional MakeDb options for junction alignment information
enhancement minor resolved
#91: Provide a quiet option?
proposal trivial wontfix
#112: MakeDb.py - duplicated germline solutions
bug major resolved
#111: Add grouping field to CreateGermlines arguments
proposal minor resolved
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