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  2. B Cell Repertoires
  3. scoper

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Issues (1–24 of 24)

Title T P Status Votes Assignee Created Updated Actions
#22: Add additional grouping field to scoper
proposal minor resolved
#21: Improve hierarchicalClones performance
enhancement minor new
#16: Add SCOPer to the Kleinstein Lab website
task minor new
#12: Error in uniroot
bug major resolved
#23: Assigning clones doesn't work for heavy-only single cell data
bug major resolved
#24: Check naming convention for cell_id
enhancement trivial wontfix
#2: Can we do LaTex math in MkDocs on RTD?
enhancement major resolved
#1: R CMD check issues to resolve
bug major resolved
#20: Benchmark scoper vs DefineClones and light_cluster
task major new
#19: Package startup messages issue by cloning functions
bug minor resolved
#18: Cloning fails on single-cell TCR data
bug major resolved
#17: Suppress package load messages
bug minor resolved
#15: Improve vignette
enhancement major resolved
#13: "spectralClones - vj" test fails
bug major resolved
#14: Replace data_frame with tibble
bug minor resolved
#8: Function argument cleanup
enhancement major resolved
#9: Log fixes
enhancement major resolved
#10: Convert list output to an class and split out plot function
enhancement major resolved
#11: Update ExampleDb docs
bug trivial resolved
#7: plotInterVsIntra causing error
bug major resolved
#6: ` Error in h.ucv.default(unique(db_dff$VALUE), 4)`
bug major resolved
#5: Error in `calculateInterVsIntra()`
bug major resolved
#3: Replace package imports with importFrom
enhancement minor resolved
#4: Verify alakazam and shazam dependencies
task trivial resolved