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  3. miARma

Issues

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Issues (76–100 of 149)

Title T P Status Votes Assignee Created Updated Actions
#86: Understanding miRGate scoring
proposal major resolved
#84: Understanding miARma-seq plot
bug major resolved
#80: Error running DeNovo
bug major resolved
#81: How to get unaligned reads with bowtie for each entry files
proposal major resolved
#63: Error at expression analysis using EdgeR
bug blocker resolved
#75: Execution time for DeNovo module and questions
bug minor resolved
#78: miRNA analysis on EST sequences using miARMASeq
bug major resolved
#74: Target Prediction Module - Empty result files in miRGate_results
bug major resolved
#72: miARma/bin/Linux/cutadapt/cutadapt/calign.so: undefined symbol: PyString_Type
bug major resolved
#69: 501 Protocol scheme 'http' is not supported
bug major resolved
#62: miARma run issuse
bug major resolved
#64: Novel miRNA target prediction
task major resolved
#51: converting read counts to rpkm
proposal major resolved
#65: how to run miARmaSeq with bam file
proposal major resolved
#66: EdgeR output for miRNA analysis
bug major resolved
CBBIO
#68: known miRNA pipeline using edgeR for DE
bug major resolved
CBBIO
#61: PDFs and HTML output in miRDeep2
proposal major new
#55: error while runing miARma
bug major resolved
#58: Problem with ReadCounts module
bug blocker resolved
#59: Running DE module with unknowingly incorrectly named table file
bug trivial resolved
#60: Running DE module with unknowingly incorrectly named table file
bug trivial duplicate
#57: a strange gzip error
bug major resolved
#56: readcounts are not consistent with BAM.
bug major resolved
#54: an error from running with mouse databases
bug major resolved
#52: an error from an example run for Denovo miRNA
bug major resolved
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