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  2. CGE
  3. ResFinder

Issues

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Issues (76–100 of 108)

Title T P Status Votes Assignee Created Updated Actions
#41: Warning: No panel was detected for the species: klebsiella
bug major resolved
#29: docker container: resfinder tests fail due to git issue after conda python env added to dockerfile
bug major resolved
#31: How to properly test ResFinder
bug major resolved
#35: The FASTA file of aminoglycoside don't include these genes of strA and strB
bug major resolved
#40: Problem while running pointfinder
proposal major resolved
#27: IndexError raised during Resfinder run
bug minor resolved 1
#36: ERROR: test_on_data_with_just_point_mut_using_kma
task major resolved
#34: Error using kma on reads file
bug major resolved
#32: Error: BLAST did not run as expected. The expected output file, ~/out_gyrA.xml, did not exist
bug major resolved
#28: bug in pointfinder/phenotype2genotype
bug major resolved
#25: Depth column in kma.res output
task major resolved
#24: Fluoroquinolones
bug minor resolved
#21: Test failed
bug major resolved 1
#19: gz paired end reads
bug major resolved
#17: cme genes family not screened
enhancement major resolved
#15: ResFinder Database creation
bug major resolved
#12: syntax warning
enhancement trivial resolved
#13: tabulate python module :: required
enhancement trivial resolved
#20: Merge 4.0 branch to master?
enhancement major resolved 1
#22: Correct version active at https://cge.cbs.dtu.dk/services/ResFinder/ ?
bug major resolved
#18: How to get .txt output?
bug major resolved
#14: resfinder empy results files ?
bug major resolved
#10: resfinder.py uses gzip but doesn't import it
bug major resolved
#9: 'None Type Comparison' issue when running Blaster with ResFinder results
bug major resolved
#11: BLAST did not run as expected
bug major resolved
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