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  3. miARma

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Issues (1–25 of 47)

Title T P Status Votes Assignee Created Updated Actions
#135: Erros trying to execute miRNA de novo and circRNA examples
bug minor new
#132: How to upgrade FastQC
enhancement major new
#129: De novo differential expression error: print(resultsfiles) : object 'resultsfiles' not found
bug critical new
#116: Problems with custom GTF
bug major resolved
#97: Functional Analysis ERROR and Target Prediction empty
bug major closed
#67: Known miRNA identificaton
bug major duplicate
#79: Use miARmaSeq for only DE analysis and target prediction
task major closed
#83: error while running miARMA
bug critical resolved
#89: Functional analysis error
bug major closed
#98: Is this a BUG in TargetPrediction.pm?
bug blocker resolved
#94: QC_EdgeR read.table() error with check.names=TRUE
proposal major resolved
#95: QC_EdgeR() boxplot of normalized counts
proposal major new
#87: Using script in config files
enhancement major resolved
#86: Understanding miRGate scoring
proposal major resolved
#63: Error at expression analysis using EdgeR
bug blocker resolved
#62: miARma run issuse
bug major resolved
#64: Novel miRNA target prediction
task major resolved
#55: error while runing miARma
bug major resolved
#58: Problem with ReadCounts module
bug blocker resolved
#59: Running DE module with unknowingly incorrectly named table file
bug trivial resolved
#56: readcounts are not consistent with BAM.
bug major resolved
#45: check that fa file included within indexes has correct name
task major resolved
#44: adapter for circRNAs and mRNAs
task major resolved
#42: Change in feature ?
proposal major resolved
#41: merge identified entities from summary to Readcount section
enhancement major resolved
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